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Table 1 MicroRNA expression profiling in TIA-depleted HeLa cells

From: Identification of a set of miRNAs differentially expressed in transiently TIA-depleted HeLa cells by genome-wide profiling

Fold change

pval (LiMMA)

FDR (LiMMA)

miRNA ID

miRNA ID update

2.21

4.13E-06

8.26E-05

hsa-miR-197_MM2

hsa-miR-197-3p

3.84

5.00E-07

1.70E-05

hsa-miR-210

-

2.3

4.84E-06

9.38E-05

hsa-miR-373*

hsa-miR-373-5p

2.75

3.78E-06

7.77E-05

hsa-miR-492

-

2.79

1.38E-06

3.55E-05

hsa-miR-498

-

2.5

5.22E-06

9.89E-05

hsa-miR-503

hsa-miR-503-5p

4.29

1.00E-07

4.05E-06

hsa-miR-572

-

3.78

3.60E-07

1.27E-05

hsa-miR-586

-

2.24

5.01E-06

9.59E-05

hsa-miR-612

-

2.82

4.50E-06

8.81E-05

hsa-miR-615

hsa-miR-615-3p

3.18

1.91E-06

4.50E-05

hsa-miR-623

-

2.84

1.23E-06

3.31E-05

hsa-miR-625

hsa-miR-625-5p

2.11

3.63E-06

7.54E-05

hsa-miR-638

-

2.44

1.64E-06

3.96E-05

hsa-miR-658

-

3.61

2.57E-06

5.63E-05

hsa-miR-663

hsa-miR-663a

2.23

2.75E-06

5.96E-05

hsa-miR-671

hsa-miR-671-5p

3.65

3.18E-06

6.70E-05

hsa-miR-769-3p

-

3.44

2.60E-07

9.88E-06

miRPlus_17832

n.d.

2.73

9.60E-07

2.77E-05

miRPlus_17836

hsa-miR-30b-3p

4.38

5.70E-07

1.91E-05

miRPlus_17856

n.d.

3.34

2.26E-06

5.13E-05

miRPlus_17864

hsa-miR-744-5p

2.5

2.91E-06

6.23E-05

miRPlus_17867

hsa-miR-203a

2.7

6.30E-07

2.04E-05

miRPlus_17877/17960

hsa-miR-483-5p

2.33

4.69E-06

9.13E-05

miRPlus_17878

hsa-miR-193a-5p

2.84

1.87E-06

4.43E-05

miRPlus_17881

n.d.

3.63

5.50E-07

1.85E-05

miRPlus_17890

n.d.

3.3

2.16E-06

4.94E-05

miRPlus_17942

hsa-miR-125a-3p

2.15

2.85E-06

6.14E-05

miRPlus_17950

hsa-miR-371-5p

2.6

1.34E-06

3.45E-05

miRPlus_17961

hsa-miR-629-5p

  1. miRNA cluster defining a signature of up-regulated miRNAs in TIA-depleted HeLa cells. The microarray data were analyzed by the limma R method. Fold is an average measure of the fold change in differential expression and the false discovery rate (FDR) indicates the expected percentage of false positives (FDR < 0.0001). miRNA ID update are miRNAs and miRPlus renamed in agreement with miRBase 18 database. n.d. means non-determined.