| cDNA-based Alignment | Repeat-based Alignment |
---|---|---|
2nd exon length (nt) | 1721 | 1524 |
Number of elements | 25 | 27 |
Average element Size (nt) | 68 | 56 |
Range of element Sizes (nt) | 12 – 357 | 11–192 |
Element Patterns (2nd exon) | 27 | 14 |
Element Patterns (intron + exons) | 31 | 21 |
Type 1 repeats (red*) | 4 | 4 |
Type 2 repeats (blue) | 4 | 4 |
Type 3 repeats (green) | 4 | 2 |
Type 4 repeats (yellow) | 4 | 3 |
Type 5 repeats (purple) | 3 | 2 |
Average set nt diversity | 0.0194 | 0.0216 |
Overall nt diversity | 0.3011 | 0.2779 |
Average element nt diversity | 0.0846 | 0.0629 |