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Table 5 Transcription factor binding sites (TFBSs) identified upstream from the open reading frames encoding the deregulated proteins

From: Integration of transcriptome and proteome profiles in glioblastoma: looking for the missing link

TFBS

Proteins with TFBS

P-value

bZIP911

MBP

0.05

NIL

SYN1

< 0.01

PPARG

TUBB4

0.01

PPARG-RXRA

GDI1, MBP, TUBB4

0.01–0.04

RSRFC4

SYN1

0.03

TOPORS/LUN-1

All

< 0.01–0.05

  1. P-value: probability of the presence of the TFBS upstream from the open reading frame of the protein, corrected for multiple testing using the Benjamini–Hochberg method
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BMC Molecular Biology

ISSN: 1471-2199

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