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Table 2 Classification/annotation of small RNAs in HIST and NC libraries

From: Genome-wide identification of brain miRNAs in response to high-intensity intermittent swimming training in Rattus norvegicus by deep sequencing

Category

HIST sRNAs

NC sRNAs

Unique

(%)

Redundant

(%)

Unique

(%)

Redundant

(%)

rRNA

142,588

13.37

2,856,748

10.25

151,074

14.30

3,330,834

16.12

tRNA

42,591

3.99

1,143,993

4.10

34,900

3.30

789,023

3.82

scRNA

796

0.07

8178

0.03

777

0.07

6108

0.03

snRNA

6533

0.61

60,646

0.22

6648

0.63

59,169

0.29

snoRNA

7540

0.71

265,995

0.95

7049

0.67

236,933

1.15

srpRNA

1619

0.15

20,165

0.07

1633

0.15

22,995

0.11

exon_antisense

3517

0.33

4665

0.02

2999

0.28

3922

0.02

exon_sense

180,213

16.90

226,294

0.81

179,548

16.99

219,397

1.06

intron_antisense

11,691

1.10

14,701

0.05

10,414

0.99

12,811

0.06

intron_sense

81,952

7.68

121,328

0.44

93,129

8.81

128,385

0.62

Repeat

50,441

4.73

66,747

0.24

57,451

5.44

74,215

0.36

Unannotated

537,174

50.00

23,088,321

83.00

510,863

48.00

15,774,525

76.00

Total clean reads

1,0,66,655

100

27,877,781

100

1,056,485

100

20,658,317

100